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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs2143224 chr20:44162485 T/C WFDC3 chr20:44376583-44420571:- 0.85 5.99 2.0E-7 Box Plot
ACC rs2143225 chr20:44162500 C/T WFDC3 chr20:44376583-44420571:- 0.85 5.99 2.0E-7 Box Plot
ACC rs2147615 chr14:65392918 G/A CHURC1 chr14:65381079-65411309:+ 0.79 5.19 3.5E-6 Box Plot
ACC rs2154594 chr22:24254055 A/G GSTT2 chr22:24322249-24326106:+ 0.48 5.41 1.59E-6 Box Plot
ACC rs2159005 chr2:242109849 G/A GPC1 chr2:241375088-241407495:+ 0.56 5.22 3.15E-6 Box Plot
ACC rs2161548 chr5:96318145 G/A ERAP2 chr5:96211643-96255420:+ 0.95 10.88 5.25E-15 Box Plot
ACC rs2165162 chr11:74659789 G/C XRRA1 chr11:74518784-74660245:- 0.77 6.75 1.22E-8 Box Plot
ACC rs2165163 chr11:74660143 G/C XRRA1 chr11:74518784-74660245:- 0.77 6.75 1.22E-8 Box Plot
ACC rs2173580 chr1:56036115 C/T C1orf175 chr1:55107427-55207980:+ 0.73 5.35 2.01E-6 Box Plot
ACC rs2186366 chr22:24254113 A/G GSTT2 chr22:24322249-24326106:+ 0.5 5.7 5.67E-7 Box Plot
ACC rs2191019 chr19:42080923 T/C CEACAM21 chr19:42055886-42093197:+ 0.76 6.6 2.15E-8 Box Plot
ACC rs2223551 chr20:44159015 C/T WFDC3 chr20:44376583-44420571:- 0.79 5.12 4.52E-6 Box Plot
ACC rs2223552 chr20:44159474 G/A WFDC3 chr20:44376583-44420571:- 0.87 6.26 7.45E-8 Box Plot
ACC rs2233238 chr11:60145441 G/C MS4A14 chr11:60146003-60185229:+ 0.36 5.38 1.82E-6 Box Plot
ACC rs2233244 chr11:60152531 G/T MS4A14 chr11:60146003-60185229:+ 0.38 5.21 3.32E-6 Box Plot